For the most part my car is runing great. It pulls strong and I am happy with the power. There are a couple kinks that I am trying to work out to make it a more drivable car. If I really stand on the throttle it runs great and pulls strong. When I try to just mildy to moderately accellerate it will sometimes start jerking radically enough that I have to push in the clutch and rev it a few times to get it to settle down then continue. I'm not sure what to adjust to control this behavior. Possibly related to this is run I try to just cruise or sometimes during very slow deceleration it will start jerking as well.

Sounds like you have a farily large step in your ignition timing table. Take a look at where you would be when the jerking would start (probably 50-70kpa and the RPM where the jerking starts) and you will probably find a jump from 18ish to 35ish. See if you can smooth that out (may be tricky in an 8x8 map without compromise) and that should solve the jerking problem.

Jon, Thanks for the quick response. Is ther a way that I can send you my BIN file to look at? My email is dswalterwi@gmail.com if you want to do it that way.

I did a test drive before making changes to see where the map and rpm's were suspect at cruising and found it to be around 34 to 36 MAP and about 2200 - 2500 RPM.
My ignition timing was:
40 - 15 22 25 40 40 40 42 44
30 - 16 20 35 40 40 40 42 44
950 1500 2500 3500 4500 5500 6500 7500

I changed the 35 at 2500 rpm to 30 and that helped smooth it out alot. I also bumped the AFR up a slight bit in the VE tables of the same area.

Thanks for your help,

Running smooth,
Don.